If the AC amplitude is your information, why do you use RMS? It will accumulate the noise and offset too !
I would do it with tone detection and grap the amplitude ...
(OK, depends on how the source is controlling the AC amplitude, if harmonics are involved and the feedback also uses RMS...)
If you use multiplexed input cards and your source output impedance isn't very low , have a look at the settle time error!
(With 500k total Samplerate with 5k Ohms source impedance I found >1% error)
At least I would give it a check, one channel a 'stable' source signal, the rest to the generator with 3000Hz and stepped amplitudes, look at influences at the stable channel.
If you don't really need 'simultanious' values (slowly changing signals) but more accuracy, sample each channel for some ms individually , calc the amplitudes and save them.
Greetings from Germany
Henrik
LV since v3.1
“ground” is a convenient fantasy
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