This seems like a missing test from the analyzer suite to check if the "Separate compiled code from source file" checkbox is ticked or not.
A test similar to the "Enabled Debugging" test, which lets you check for VIs with the setting either enabled or disabled?
It is something that I am sure a number of people like myself have already created one, but I think it would be nice to come already supplied with the analyzer
FYI, this test currently exists as a download from the VI Analyzer Enthusiasts community group:
Test - Separate Compiled
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