Unfortunately, E Series boards cannot synchronize with the 10 MHz PXI backplane clock. They do, however, have access to the PXI trigger lines, which are basically the RTSI lines. Except for line 6 which is the star trigger line. They can only read from this line.
The example program you have selected will definitely be part of your solution. It allows you to share the scan clock timing signal between two boards. If you would like the slave board to acquire at a slower scan rate, you could always route the master's scan clock to one of the slave's on-board counters which can act as a frequency divider. The output of this counter can become the new slower scan clock for the slave board. Use the Generate Pulse Train shipping example VI as your frequency d
ivider. Finally, make sure you route the signals appropriately and you'll be in business.
I hope this helps!
Russell McMurtrey
Applications Engineer
National Instruments
http://www.ni.com/support