Hello DMBS,
Any method that used the internal clock should not be OS dependent and you should be able to get consistent results. Regardless of that, I hope you can read
this Developer Zone document where you can learn about M-Series (like the one you have) Synchronization.
There is a shipped example called "Multi-Device Synch-Analog Input-Cont Acquisition.vi" that you can find on LabVIEW example finder. This will not work immediately but it is a good starting point. You will need to share the Trigger using a PFI line and use some external wiring.
If you sample at the same rate, you can just import your sample clock to a PFI line. Once those two signals are connected, you should be good to go.
Hope this helps,
Message Edited by Yardov on 09-12-2007 01:23 PM
Gerardo O.
RF SW Engineering R&D
National Instruments