Hi Sunny,
What is the frequency of these PWM signals you need to output? Since you are controlling heaters, I'm guessing you'll be working with lower frequencies, in which case a software timed application could work for you. I suggest taking a look at some of the digital generation examples in the NI example finder (if you're using LabVIEW). Just open LabVIEW and go to Help >> Find Examples... Then under the Browse tab, go to Hardware Input and Output >> DAQmx >> Digital Output.
If you are using a programming language other than LabVIEW, the best place to look is either in the examples shipped with the DAQmx driver (by default at C:\Program Files\National Instruments\NI-DAQ\Examples) or in the online
Example Code Library.
Thanks,
Justin M.
National Instruments