The 4060 is not a good instrument for measuring frequency. To accurately measure frequency you want a digitizer, or something with behavior similar to a digitizer, like a Multifunction DAQ board, a FlexDMM (407x), or a DSA board. For one thing, you generally use software times sampling with a DMM. For another, the maximum reading rate of a 4060 is 60 samples/sec. Therefore, they nyquist theorum states that you're going to alias any signal above 30 hz. This means that unless your signal is under 30 hz, you're pretty much out of luck luck (technically, you could calculate the actual frequency by using the apparent frequency, but that's a pretty crude solution, and if I remember the formula right, you'd already have to know the frequency of the signal +-15 hz or so).
Regards,
Ryan K.