Thank you for your interested in the PID Toolset.
The problem you are experiencing can be related to two problems:
1) The sampling time that you are specifying is too big (low frequency) for the dynamics of the system. This would generate alias and would give an unexpected output simular to band pass. Verify what is the maximum frequency of your transfer function and what is the maximum frequency of your sampling time. As a rule of thomb, this should be at least 2 times the maximum frequency but 10 times is always recommended;
2)the coefficients that you are trying to create use are very sensitive and this change could modify the transfer function and, consequently, the response of the VI;
3) There is a problem with this specific set of data/coefficients that ca
n't be handled by the VI. So, I would suggest to convert the polynomial coefficients to pole/zero/gain representation or State-Space representation and try to substitute the Transfer Function. If you have difficult to do this, you could look into this Toolkit: http://sine.ni.com/apps/we/nioc.vp?cid=13854〈=US
If nothing works, I would be happy to look into this issue in more details. However, I would need a VI that can simulate the problem with the data used to apply to the Transfer Function and the coefficients used in simulate.
Barp - Control, Simulation, RTT and HIL - National Instruments