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Running DIAdem automatically - timing issues

Hello,
 
I need to have DIAdem automatically run two different scripts.  Currently, I am using Windows scheduler to open DIAdem at specific times and have my script exit DIAdem when it is finished.  I do not like this method, and am looking for a way to keep DIAdem open and to run a script almost continuiously. 
 
Also, a time-based method may not be the best because each time the script runs, it may take different amounts of time (it may only take 5 seconds one time, and one hour the next).  So I would like to keep DIAdem open, and continuiously run a script until it ends, and then run a second script, then the first again, and on and on.  I know I could do this with some loops and maybe a pause, but I didn't know if there was a more elegant way I wasn't thinking of.
 
Thank you! 
 
Julia Moeller
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This belongs in the DIAdem forum - sorry!
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