Hello,
I don't know an official way to do this but the compiler of the LabVIEW FPGA module is a tool from Xilinx so I don't have all the internal information. On the other hand there are 3rd party tools available that can run any application as a service (e. g.
here) so maybe this could be a solution for you.
Best regards,
Jochen Klier
National Instruments Germany