Rciardo,
I attached here an example that I built in LabVIEW 6i, there are two VIs involved, Main Control.vi and Pop Up Chart.vi, you have to place them in the same directory in your drive, and run the Main Control.vi, leave those values as default and click in the button Pop Up Chart, this will bring the Pop-up window with a chart on it that has two sources and have the feature of stack plots. Try resizing it and you'll see that the whole windows maintains proportions.
I assume that your issue has something to do with the VI Properties set. Check the properties that the Pop Up Chart.vi has in Window Size and Window Appearance, for example I set Window Size as to current size when I created it, also I set Scale objects as window resizes, in Window Appea
rance I set Auto-Center, Use system color, allow user to resize window, show front panel when called and close afterwards if originally closed, which I believe that this feature is also going to help you to close the window when finish using it.
Take a look to it and if you need it to be saved in another version of LabVIEW please respond to this same posting and I'll get an email telling me of new activity, and if I don't reply just go to www.ni.com/ask and send us an email just saying that I have an example and the name of that example please.
Good luck!
Nestor Sanchez
Applications Engineer
National Instruments
Nestor