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Best practice for use of PPLs in Multi-OS projects

I am attempting to reduce build time, crash rate, and deployment issues of my project by precompiling some of the libraries into PPL. I successfully built and used them on my Windows host exe, and attempted to do the same on my cRIO RT project - however they share some code, so the PPL compiled for windows is brought in as a dependency. I attempted to use a conditional disable, and while this somewhat works, it doesn't explicitly remove the dependency (I suppose it only counts at compile time). I have done some research and have seen that some users suggest only having a single ppl and recompiling it for the correct OS when you load the project - but this seems overly complex. 

Could someone outline current suggestion for how to best approach this, as I am still interested in using PPLs.

Cheers,

Barnaby

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