Labview will always be calling directly into the DLLs (hence the lack of .cs or .xml in your executable). Are you creating an installer, or just an executable? And are you including any file beyond just the dependencies (i.e.DLLs that your VI is specifically calling into) in your installer?
Also, is there a specific issue or problem that you're running into with your executable?
James M. | Applications Engineer | National Instruments