Hi Cappy,
Could you post this question to the Hardware > Counter/Timer or Hardware > Multifunction I/O forums? I think you will get more responses there.
Here is a link.
The hardware is usually a better differentiation since software can support such a huge range of functionality.
The data rates you are talking about sound reasonable. Are you using the USB or the AT interface?
One other thing to be aware of is that the samples taken will not be simultaneous due to the multiplexed nature of the MIO board measurements. However if you know the channel clock rate(output from one of the VI's), then you can calculate the t
ime difference between each measurement and correct your phase measurements by that amount.
If you have more questions, please post this to the other forum and copy all of our discussion to let everyone know what we have talked about already.
Best Regards,
John Nieri
Applications Engineer
National Instruments