Within LabVIEW Build Specs you can specify a version for an executable that is built. You can presently see this from within the Windows add/remove program and there are some funky ways of getting this version with .net or WinAPI calls but you should be able to do this from LabVIEW similar to the app version as shown below.
This should also be within LabVIEW so that it can work from LabVIEW Real-Time as well.
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Duplicate of http://forums.ni.com/t5/LabVIEW-Idea-Exchange/Make-App-Version-return-the-application-version-not-th...