After running the "Create Embedded Target..." utility and cloning from the unix console target, the new target wasn't setup as it was suppose to be. The new folder under unix (amcc440gx\unix_amcc440gx_LEP_TargetPlugin) only contained *.ctl's and no *.vi's. In addition the *.ctl's had not been renamed so they matched what was in the unix_LEP_TargetPlugin directory. The LEPPlugins.ini file had been properly updated to:
No, the folder in not marked read-only. You were correct in that I was not creating it on the same level as the template. If I create it on the same level that would not completely match the existing hierarchy of OS >> Target >> Variant. There was no existing targets under unix. So if the utility has a that limitation that you mentioned, perhaps I will have to do this manually. Next time I can use this new target as the template.