The 5102 is capable of measuring the phase between two channels. This phase calculation is done in software, therefore the 5112 would not help you any further. When you are measuring the phase delay you need to specify what the "other channel" is. This can be done with a property node. You will also need to enable the other channel by specifying channel "0,1" in the niScope configure vertical, or two separate niScope configure vertical. However when you call Fetch Measurement you can only wire in one channel, and the measurement will then internally measure both channels to measure the phase. You don't need to reinitialize the board each time. You simply need to configure both channels to sample raw data, then the Fetch Measurement on single
channels with the other channel configured as the other channel. You can have more that one Fetch Measurement in your VI if you need more than one measurement.
-Mike