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How can I configure port "C" (or #2) as high nibble input low nibble output on DIO 96

You can not configure a port on DIO96 as two nibble ports. In one port you must have all bits configured for inputs or for outputs. If you need to have 4 bits as inputs and 4 bits as outputs you must use two 8-bit ports.
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NI-DAQ will generate an error when trying to configure port C as two 4-bit ports. NI-DAQ does not support this function, but register-level programming can access this feature;

For information on Register Level Programming you can visit www.ni.com/support/daqsupp.htm
and follow the Register Level Programming link.
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