Oh and actually my readings were not that far off, it turns out that the Fluke Multimeter that my maintenance dept. lent to me was not designed to handle 10,000 Hz signals.
I then used a scopemeter (similar in function to oscilliscope) to check the Vrms, Frequency and Peak voltages, they were closer to 3 Vrms, but the page on the SCXI-1540 stated +/- .002V should be the target variation, I was getting 3.06, and my frequency was always higher no matter what frequency I selected in my channel. At 10,000 Hz selected I was typically seeing 10,360 Hz from the board. At 5,000 Hz excitation selected I was seeing 5250 Hz, etc.