Hi. Welcome to the wonderful world of graphical dataflow programming. What you're asking for is fairly general, so I'll suggest first that you take some LV tutorials, either on the web, or using NI's courses. One such tutorial can be found
here.
Next, you can use the example finder (Help>>Find examples) to see how logging and acquisition programs should work.
If I understand what you want to do correctly, it sounds like the simplest way would be to use a shift register (search for it) to store the data in the acquisition loop and only transfer it to the logging loop when it's time to log it. Communication between loops can be handled in a variety of ways - from the simple local variable to the more complex mechanisms which can be found in the advanced>>synchronization palette.
I hope these lines help set you on the right path. If you looked through the information and haven't found anything, feel free to post again.
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