You would probably see your problem if you ran the VI in highlight execution or single stepping mode and then you'll see that you have at least two bugs - the minor one is that you're assuming that the array of terminals is parallel to the array of control refs, but it's not, because the first terminal is the output one. The fastest way to resolve this is probably to only increment your counter inside the false case.
The more major is that you're reading the number of terminals on the node before you're resizing it, so that your loop only runs two times.
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