Hi Mike,
It looks like you are working on this issue with Avinash via phone/email, but for others who may be interested, there are two bugs filed that are somewhat related, one is regarding different execution times depending on the order of unbundling, the other is in regards to slowdowns in the development environment with large projects, where a project with a huge number of VIs takes longer to do things like open the VI Hierarchy, but it does not specifically mention things like moving wires taking a significantly longer period of time. It may be helpful to send a project that can reproduce this also, which you may want to do via email/ftp site.
Doug M
Applications Engineer
National Instruments
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